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bowl brother of odd with entrails limited [ Ceratitis capitata (Mediterranean fruit fly) ]

Gene ID: 101450979, updated on 15-May-2024

Summary

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Gene symbol
bowl
Gene description
brother of odd with entrails limited
See related
EnsemblRapid:LOC101450979
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratitis capitata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Ceratitis; Ceratitis
Also known as
BOWEL
Orthologs
fruit fly all
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Genomic context

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See bowl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Ccap_2.1 (GCF_000347755.3) Unplaced Scaffold NW_019378567.1 (1421872..1454831, complement)

NW_019378567.1Genomic Context describing neighboring genes Neighboring gene Regulator of eph expression Neighboring gene protein bark beetle Neighboring gene uncharacterized LOC101455121 Neighboring gene uncharacterized LOC101455298 Neighboring gene uncharacterized LOC105665146

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019378567 Unplaced Scaffold Reference Ccap_2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California. Calla B, et al. BMC Genomics, 2014 Feb 5. PMID 24495485, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryo development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic hindgut morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein bowel

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratitis capitata Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ccap_2.1 Primary Assembly

Genomic

  1. NW_019378567.1 Reference Ccap_2.1 Primary Assembly

    Range
    1421872..1454831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004531286.3 → XP_004531343.1  protein bowel

    UniProtKB/TrEMBL
    A0A811UPJ2
    Related
    XP_004531343.1, XM_004531286.3
    Conserved Domains (2) summary
    COG5048
    Location:235 → 375
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:243 → 263
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_020860358.1 → XP_020716017.1  protein bowel

    UniProtKB/TrEMBL
    A0A811UPJ2
    Related
    XP_020716017.1, XM_020860358.1
    Conserved Domains (2) summary
    COG5048
    Location:235 → 375
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:243 → 263
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_020860359.1 → XP_020716018.1  protein bowel

    UniProtKB/TrEMBL
    A0A811UPJ2
    Related
    XP_020716018.1, XM_020860359.1
    Conserved Domains (2) summary
    COG5048
    Location:235 → 375
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:243 → 263
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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